Installation

Using pip

To install AltamISA, run this command in your terminal:

$ pip install altamisa

This is the preferred method to install AltamISA, as it will always install the most recent stable release.

If you don’t have pip installed, this Python installation guide can guide you through the process.

Using conda

If you like conda as much as we do, you can install AltamISA from the Bioconda channel. This assumes that you have already setup conda and the Bioconda channel as described in the Bioconda manual.

$ conda install altamisa

From sources

The sources for AltamISA can be downloaded from the Github repo.

You can either clone the public repository:

$ git clone git://github.com/bihealth/altamisa

Or download the tarball:

$ curl  -OL https://github.com/bihealth/altamisa/tarball/master

Once you have a copy of the source, you can install it with:

$ python setup.py install